Skip to main content

Protion Origami via Genetic Fusions

Project description

=====
worms
=====


.. image:: https://img.shields.io/pypi/v/worms.svg
:target: https://pypi.python.org/pypi/worms

.. image:: https://img.shields.io/travis/willsheffler/worms.svg
:target: https://travis-ci.org/willsheffler/worms

.. image:: https://readthedocs.org/projects/worms/badge/?version=latest
:target: https://worms.readthedocs.io/en/latest/?badge=latest
:alt: Documentation Status

.. image:: https://pyup.io/repos/github/willsheffler/worms/shield.svg
:target: https://pyup.io/repos/github/willsheffler/worms/
:alt: Updates



Protein Origami via Genetic Fusions


.. image:: https://lh5.googleusercontent.com/9OQLQnMD1IRah4lSRZtROkiLuabY6oclGnGhkGJhsT-gfiFBo_uAQyu-EOxRXziC75iiMpPkTBxmYxE214Si=w2177-h1945
:width: 300px


* Free software: Apache Software License 2.0
* Documentation: https://worms.readthedocs.io.


Features
--------

please send angry emails to willsheffler@gmail.com until there are docs here.

Credits
---------

This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template.

.. _Cookiecutter: https://github.com/audreyr/cookiecutter
.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage



=======
History
=======

0.1.20 (2018-04-16)
------------------

* add more dihedral sym files

0.1.19 (2018-04-6)
------------------

* minor performance impovements in hash-index based search

0.1.17 (2018-04-4)
------------------

* hash-index based search for Cyclic(..., origin_seg=...)

0.1.16 (2018-03-15)
------------------

* I52 symmetry bug fix

0.1.15 (2018-03.05)
------------------

* add NullCriteria that always returns 0 err


0.1.14 (2018-02-28)
------------------

* fix provenance bug in 'cyclic entry' cases
* try to make serialization of Segments more efficient

0.1.13 (2018-02-16)
------------------

* raise exception if system too large

0.1.12 (2018-02-16)
------------------

* partial bignum fix

0.1.11 (2018-02-15)
------------------

* fix memory bug
* make distribution work better
* maybe fix pose bug, still some logic err, but maybe ok

0.1.10 (2018-02-15)
------------------

* add max_results option to grow
* fix C2 sym bug
* fix xform axis cen bug
* fix memory "bug" with batch parallel processing

0.1.9 (2018-02-08)
------------------

* add max_samples option to grow

0.1.8 (2018-02-07)
------------------

* origin_seg bug fix

0.1.6 (2018-02-01)
------------------

* middle-to-end cyclic fusions working
* add pretty logo of mid-to-end C3 fusion

0.1.6 (2018-02-01)
------------------

* bug fix in fullatom option

0.1.5 (2018-02-01)
------------------

* add fullatom option to Worms.sympose
* cyclic premutation working for simple beginning-to-end case

0.1.4 (2018-02-01)
------------------

* pypi deplolment derp

0.1.3 (2018-02-01)
------------------

* pypi deplolment derp

0.1.2 (2018-01-23)
------------------

* Add __main__ for module to run tests
* move worms.pdb to worms.data because pdb is kinda reserved
* move utility stuff to util.py
* add some interactive visualization utils for debugging

0.1.1 (2018-01-23)
------------------

* First release on PyPI.


Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

worms-0.1.20.tar.gz (700.6 kB view details)

Uploaded Source

Built Distribution

worms-0.1.20-py2.py3-none-any.whl (698.1 kB view details)

Uploaded Python 2Python 3

File details

Details for the file worms-0.1.20.tar.gz.

File metadata

  • Download URL: worms-0.1.20.tar.gz
  • Upload date:
  • Size: 700.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for worms-0.1.20.tar.gz
Algorithm Hash digest
SHA256 ec1d62071f7f74b6ab2ba4603131ce1d1cde01e9afd5f74ebb08bc4287042e64
MD5 f523575925b4342491157930f63208fb
BLAKE2b-256 13547c2e498cd804646f7b3b7ec73531838214d39327004c69e776ce2ae7c151

See more details on using hashes here.

File details

Details for the file worms-0.1.20-py2.py3-none-any.whl.

File metadata

File hashes

Hashes for worms-0.1.20-py2.py3-none-any.whl
Algorithm Hash digest
SHA256 9accb132b172fafe11ad8b128a8243612c54e5eb65ea3a2476227aac785bc3bc
MD5 81fcbab649330bb0905ef29a7dfeafd5
BLAKE2b-256 29c8a5de017f08dc4236baccbeee2acc26da0de1a026f438b88e7cb48807a456

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page