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A package for WSI sampling.

Project description

# WholeSlideImageSampler

Tools for sampling patches from Whole-Slide-Images (WSIs) readable by [openslide](https://openslide.org/) using Python ('tested' on 3.5).

# Install

`pip install wsisampler`

You will need to install openslide. This is included in the dependencies so may be automatically installed. If not I found this to help:

```bash
#!/bin/bash

sudo apt-get install openslide-tools
pip install openslide-python
```

# Example usage

Please see demo.ipynb [here](https://github.com/Peter554/WholeSlideImageSampler/blob/master/demo.ipynb).

Project details


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