xarray tools for behavioral data.
Project description
xarray-behave
Installation
Install a working conda installation with python 3.7 (see here). If you have conda already installed, make sure you have conda v4.8.4+. If not, update from an older version with conda update conda
.
If you want to use xb with DeepSS, following the installation instructions for DeepSS.
GUI
For using with the GUI:
conda env create -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/master/env/xb_gui.yml -n xb
The GUI can be started by activating the new environment conda activate xb
and then typing xb
in a terminal. See xb --help
for usage/arguments/keys.
GUI usage is documented here.
Non-GUI
If you do not want to use the GUI, e.g. if just want to create, load, save datasets:
conda env create -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/master/env/xb.yml -n xb
See demo.ipynb
for usage examples.
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