xarray tools for behavioral data.

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License: MIT License

Author: Jan Clemens

Requires: Python >=3.6

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Project description

xarray-behave

Installation

Install a working conda installation with python 3.7 (see here). If you have conda already installed, make sure you have conda v4.8.4+. If not, update from an older version with conda update conda.

If you want to use xb with DeepSS, following the installation instructions for DeepSS. The DeepSS docs also contain instructions on annotating audio recordings using the GUI.

GUI

For using with the GUI:

conda env create -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/master/env/xb_gui.yml -n xb

The GUI can be started by activating the new environment conda activate xb and then typing xb in a terminal. See xb --help for usage/arguments/keys. GUI usage is documented here.

Non-GUI

If you do not want to use the GUI, e.g. if just want to create, load, save datasets:

conda env create -f https://raw.githubusercontent.com/janclemenslab/xarray-behave/master/env/xb.yml -n xb

See demo.ipynb for usage examples.

Project details

Verified details

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License: MIT License

Author: Jan Clemens

Requires: Python >=3.6

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0.35.3

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