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xpore is a python package for Nanopore data analysis.

Project description

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Python package for detection of differential RNA modifications from direct RNA sequencing.

PyPI version Documentation Status Downloads


PyPI installation (recommended)

xPore requires Python3. To install the latest release, run

$ pip install xpore 
$ pyensembl install --release 91 --species homo_sapiens  # please specify the compatible Ensembl release with your data when you install it.

See our documentation here!


Preprint

Please check out our preprint "Detection of differential RNA modifications from direct RNA sequencing of human cell lines" here.


Contacts

xPore is maintained by Ploy N. Pratanwanich and Jonathan Goeke from the Genome Institute of Singapore, A*STAR.

If you want to contribute, please leave an issue in our repo.

Thank you!

Project details


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Files for xpore, version 0.5.5
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Filename, size xpore-0.5.5-py3-none-any.whl (35.7 kB) File type Wheel Python version py3 Upload date Hashes View
Filename, size xpore-0.5.5.tar.gz (31.9 kB) File type Source Python version None Upload date Hashes View

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