Zerodose

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Project description

Zerodose

Alt text

A tool to assist in personalized abnormality investigation in combined FDG-PET/MRI imaging. Created by the department of Clinically Applied Artificial Intelligence at Copenhagen University Hospital

Installation

Note that a python3 installation is required for Zerodose to work. You can install Zerodose via pip from PyPI:

$ pip install zerodose

Usage

Synthesize baseline PET

$ zerodose syn -i mr.nii.gz -m brain_mask.nii.gz -o sb_pet.nii.gz

Create abnormality map

$ zerodose abn -p pet.nii.gz -s sb_pet.nii.gz -m brain_mask.nii.gz -o abn.nii.gz

Please see the Command-line Reference for details.

Hardware requirements

TODO

Issues and contributing

Contributions are very welcome. If you encounter any problems, please file an issue along with a description.

Project details

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Release history Release notifications | RSS feed

This version

0.0.6

Apr 10, 2023

0.0.5

Apr 4, 2023

0.0.4

Apr 3, 2023

0.0.3

Apr 2, 2023

0.0.2

Mar 31, 2023

0.0.1

Feb 1, 2023

0.0.0

Jan 31, 2023

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