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    <title>PyPI recent updates for metaphlan</title>
    <link>https://pypi.org/project/metaphlan/</link>
    <description>Recent updates to the Python Package Index for metaphlan</description>
    <language>en</language>    <item>
      <title>4.2.5</title>
      <link>https://pypi.org/project/metaphlan/4.2.5/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Wed, 15 Jul 2026 11:01:51 GMT</pubDate>
    </item>    <item>
      <title>4.2.4</title>
      <link>https://pypi.org/project/metaphlan/4.2.4/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Tue, 21 Oct 2025 09:02:44 GMT</pubDate>
    </item>    <item>
      <title>4.2.3</title>
      <link>https://pypi.org/project/metaphlan/4.2.3/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Thu, 16 Oct 2025 13:03:02 GMT</pubDate>
    </item>    <item>
      <title>4.1.2</title>
      <link>https://pypi.org/project/metaphlan/4.1.2/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Thu, 16 Oct 2025 07:47:48 GMT</pubDate>
    </item>    <item>
      <title>4.2.2</title>
      <link>https://pypi.org/project/metaphlan/4.2.2/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Wed, 04 Jun 2025 15:20:07 GMT</pubDate>
    </item>    <item>
      <title>4.2.1</title>
      <link>https://pypi.org/project/metaphlan/4.2.1/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Wed, 04 Jun 2025 08:32:40 GMT</pubDate>
    </item>    <item>
      <title>4.2.0</title>
      <link>https://pypi.org/project/metaphlan/4.2.0/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>claudia.mengoni@unitn.it</author>      <pubDate>Fri, 30 May 2025 12:39:42 GMT</pubDate>
    </item>    <item>
      <title>4.1.1</title>
      <link>https://pypi.org/project/metaphlan/4.1.1/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Wed, 22 May 2024 14:20:08 GMT</pubDate>
    </item>    <item>
      <title>4.1.0</title>
      <link>https://pypi.org/project/metaphlan/4.1.0/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Wed, 21 Feb 2024 07:58:00 GMT</pubDate>
    </item>    <item>
      <title>4.0.6</title>
      <link>https://pypi.org/project/metaphlan/4.0.6/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Wed, 01 Mar 2023 16:37:03 GMT</pubDate>
    </item>    <item>
      <title>4.0.5</title>
      <link>https://pypi.org/project/metaphlan/4.0.5/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Thu, 23 Feb 2023 09:05:13 GMT</pubDate>
    </item>    <item>
      <title>4.0.4</title>
      <link>https://pypi.org/project/metaphlan/4.0.4/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Tue, 17 Jan 2023 16:30:48 GMT</pubDate>
    </item>    <item>
      <title>4.0.3</title>
      <link>https://pypi.org/project/metaphlan/4.0.3/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Wed, 26 Oct 2022 12:03:42 GMT</pubDate>
    </item>    <item>
      <title>4.0.2</title>
      <link>https://pypi.org/project/metaphlan/4.0.2/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Thu, 22 Sep 2022 11:36:41 GMT</pubDate>
    </item>    <item>
      <title>4.0.1</title>
      <link>https://pypi.org/project/metaphlan/4.0.1/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Thu, 25 Aug 2022 07:24:38 GMT</pubDate>
    </item>    <item>
      <title>4.0.0</title>
      <link>https://pypi.org/project/metaphlan/4.0.0/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Tue, 23 Aug 2022 08:08:55 GMT</pubDate>
    </item>    <item>
      <title>4b3</title>
      <link>https://pypi.org/project/metaphlan/4b3/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>aitor.blancomiguez@unitn.it</author>      <pubDate>Mon, 22 Aug 2022 13:28:15 GMT</pubDate>
    </item>    <item>
      <title>3.1.0</title>
      <link>https://pypi.org/project/metaphlan/3.1.0/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Mon, 25 Jul 2022 09:25:52 GMT</pubDate>
    </item>    <item>
      <title>3.0.14</title>
      <link>https://pypi.org/project/metaphlan/3.0.14/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 19 Jan 2022 09:26:32 GMT</pubDate>
    </item>    <item>
      <title>3.0.13</title>
      <link>https://pypi.org/project/metaphlan/3.0.13/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Tue, 27 Jul 2021 16:30:31 GMT</pubDate>
    </item>    <item>
      <title>3.0.12</title>
      <link>https://pypi.org/project/metaphlan/3.0.12/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 21 Jul 2021 20:28:49 GMT</pubDate>
    </item>    <item>
      <title>3.0.11</title>
      <link>https://pypi.org/project/metaphlan/3.0.11/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 07 Jul 2021 11:40:06 GMT</pubDate>
    </item>    <item>
      <title>3.0.10</title>
      <link>https://pypi.org/project/metaphlan/3.0.10/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Mon, 14 Jun 2021 12:54:52 GMT</pubDate>
    </item>    <item>
      <title>3.0.9</title>
      <link>https://pypi.org/project/metaphlan/3.0.9/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Mon, 17 May 2021 13:59:01 GMT</pubDate>
    </item>    <item>
      <title>3.0.8</title>
      <link>https://pypi.org/project/metaphlan/3.0.8/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Mon, 26 Apr 2021 09:17:04 GMT</pubDate>
    </item>    <item>
      <title>3.0.7</title>
      <link>https://pypi.org/project/metaphlan/3.0.7/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 09 Dec 2020 11:28:28 GMT</pubDate>
    </item>    <item>
      <title>3.0.6</title>
      <link>https://pypi.org/project/metaphlan/3.0.6/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Tue, 24 Nov 2020 13:37:23 GMT</pubDate>
    </item>    <item>
      <title>3.0.5</title>
      <link>https://pypi.org/project/metaphlan/3.0.5/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Tue, 10 Nov 2020 18:37:05 GMT</pubDate>
    </item>    <item>
      <title>3.0.4</title>
      <link>https://pypi.org/project/metaphlan/3.0.4/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 23 Sep 2020 09:00:54 GMT</pubDate>
    </item>    <item>
      <title>3.0.3</title>
      <link>https://pypi.org/project/metaphlan/3.0.3/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Wed, 16 Sep 2020 09:37:35 GMT</pubDate>
    </item>    <item>
      <title>3.0.1</title>
      <link>https://pypi.org/project/metaphlan/3.0.1/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Thu, 25 Jun 2020 09:01:43 GMT</pubDate>
    </item>    <item>
      <title>3.0.0a1</title>
      <link>https://pypi.org/project/metaphlan/3.0.0a1/</link>
      <description>MetaPhlAn: Metagenomic Phylogenetic Analysis, v3</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Fri, 01 May 2020 00:07:13 GMT</pubDate>
    </item>    <item>
      <title>3.0.0a0</title>
      <link>https://pypi.org/project/metaphlan/3.0.0a0/</link>
      <description>MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.</description>
<author>francesco.beghini@unitn.it</author>      <pubDate>Thu, 30 Apr 2020 23:55:24 GMT</pubDate>
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