with the selected classifier
AICSImageIO for napari. Multiple file format reading directly into napari using pure Python.
Crop regions in napari manually
This napari plugin creates several regions of interest of similar area over cells in a fluorescence video (2D+time). It then gets ROIs means over time and performs signal denoising: fixes photobleaching and separates signal from noise by means of blind source separation (with or without wavelet filtering).
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
A meta plugin for processing timelapse data in napari timepoint by timepoint
A napari plugin for handling overlapping labeling data
Control point mapping and coordination transformation using napari
Read and write geojson files in napari
Scalar and vectorial models of the microscope point spread function (PSF).
GUI interface between napari and micromanager
A regionprops table widget plugin for napari
Multi-atlas whole-brain microscopy registration
A plugin to load btrack files
A napari plugin in order to crop nd-images via different modes
Projected Barzilai-Borwein Image Deconvolution with Infeasible Iterates (BBii-Decon)
A napari plugin in order to select parts of images
A plugin to perform roi registration.
Opens Nikon ND2 files into napari.
a generalist algorithm for anatomical segmentation
Control napari using a touch screen