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alpaca-variant-caller 0.3.3

An algebraic parallel SNV caller using OpenCL

AltAnalyze 2.1.0.3

User Friendly Application for Comprehensive Transcriptome Analysis

ambivert 0.5.1

AmBiVErT - AMplicon BInning Variant caller with ERror Truncation. For calling variants in amplicon based sequencing experiments

ameba 1.0

AMEBA: Advanced MEtabolic Branchpoint Analysis

ampcountpy 0.2.0

Some functions to count the expected amplifications for genomic regions given a set of primer binding locations for a multiple displacement amplification reaction.

amphipathic 0.0.0

This is a library to evaluate an aminoacid sequence and determine an amphipathic index for each alpha helix or beta sheet.

amplikyzer 0.99.4

an amplicon methylation analyzer for flowgrams (SFF files)

amplikyzer2 1.0.2

amplicon methylation analyzer for SFF (flowgrams) and FASTQ (MiSeq) files

anadama2 0.4.0

AnADAMA2: Another Automated Data Analysis Management Application 2

ANNarchy 4.6.4.1

Artificial Neural Networks architect

anndata 0.3.4

An annotated data matrix.

ANNOgesic 0.6.28

ANNOgesic - A tool for bacterial/archaeal RNA-Seq based genome annotations

annotation-refinery 1.0.2

Portable Python package to process publicly available annotated sets of genes, such as Gene Ontology and Disease Ontologyterms.

antismash-models 0.1.7

An object model for mapping antiSMASH data objects from and to Redis via aioredis.

APS_BlueSky_tools 0.0.17

Various Python tools for use with BlueSky at the APS

arachnid 0.1.7

Single Particle Data Analysis Suite

ArcRstats 0.8.alpha

geostatistical functions linking ESRI ArcGIS to R statistics packages

AREM 1.0.1

Aligning Reads by Expectation-Maximization. Based on MACS (Model Based Analysis for ChIP-Seq data)

ariba 2.10.3

ARIBA: Antibiotic Resistance Identification By Assembly

arip 1.0.2

ARIP, software to quantify bacterial resistance to antibiotics by analysing picture of phenotypic plates

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