A library of core radiation therapy modules for DICOM / DICOM RT used by dicompyler
Parse the DICOM Standard into a human-friendly JSON format.
DNA input and output library for Python and Cython. Includes reader and writer for FASTA and FASTQ files, support for samtools faidx files, and generators for solid and gapped q-grams (k-mers).
python edflib is a python package ot allow access to European Data Format files (EDF for short). This is a standard for biological signals such as EEG, evoked potentials and EMG. This module wraps Teunis van Beelen's edflib.
A simplified more transparent package for the spline modelling of electron insert factors
endocal is a cross-platform, compact GUI application for the optical distortion calibration of fluid-immersed endoscopes.
Epidemic model library for fitting epidemic models.
A library of Python code for epidemiologists
Structured Python interface to NCBI E-Utilities.
A python package for reading raw fcs files
Fit reinforcement learning models to behavioural data
Embark on a journey of single-cell data exploration.
A python package for performing flow cytometry analysis
Hierarchical nD image segmentation algorithms
Annotate and convert GEL images (PAGE, agarose gels, etc.) acquired from e.g. Typhoon scanners, GelDocs or similar.
Python interface to the GenoLogics LIMS (Laboratory Information Management System) server via its REST API.
Python interface to the Illumina Clarity LIMS (Laboratory Information Management System) (formerly Genologics) server via its postgres database.
Basic look-and-feel for the GLYCANS websites
HGVS Parser, Formatter, Mapper, Validator