dnachisel

Last released on Jun 16, 2020

Optimize DNA sequences under constraints.

genealloy

Last released on Mar 15, 2020

GeneAlloy helps designing overlapping sequences.

DnaWeaver

Last released on Feb 11, 2020

Make ordering and assembly plans for DNA sequences

bandwitch

Last released on Feb 6, 2020

Enzyme selection for DNA verification and identification

bandwagon

Last released on Feb 6, 2020

Simulate DNA band patterns for gel migration experiments

dnacauldron

Last released on Feb 5, 2020

Cloning simulation for DNA assembly (Golden Gate, Gibson...)

goldenhinges

Last released on Feb 4, 2020

DNA overhangs design for Golden Gate etc.

kappagate

Last released on Feb 3, 2020

Predict valid-clone-rates in Golden Gate DNA assemblies

pdf_reports

Last released on Feb 1, 2020

Create nice-looking PDF reports from HTML content.

tatapov

Last released on Jan 31, 2020

Provides DNA overhang misannealing data (Potatov 2018).

primavera

Last released on Jan 31, 2020

Primer selection + data analysis for DNA assembly validation

geneblocks

Last released on Jan 28, 2020

Library to compare DNA sequences (diff, common blocks, etc.)

easy-dna

Last released on Jan 24, 2020

Methods for DNA sequence reading, writing and editing.

zymp

Last released on Jan 22, 2020

Design compact sequences with many enzyme restriction sites.

synbiopython

Last released on Jan 20, 2020

Python tools for Synthetic Biology.

crazydoc

Last released on Jan 10, 2020

Read genetic sequences from stylized docx files

dna_features_viewer

Last released on Jan 10, 2020

Plot features from DNA sequences (e.g. Genbank) with Python

python_codon_tables

Last released on Nov 20, 2019

Codon Usage Tables for Python, from kazusa.or.jp

icebreaker

Last released on Nov 18, 2019

Python API for the JBEI ICE sample manager.

genome_collector

Last released on Nov 12, 2019

Easily download and store taxID genomes from NCBI

snapgene_reader

Last released on Oct 18, 2019

Convert Snapgene *.dna files dict/json/biopython.

topkappy

Last released on Oct 14, 2019

Pythonic wrapper for the Kappa language (bio simulations)

genedom

Last released on Mar 25, 2019

Genetic parts standardization

plateo

Last released on Feb 13, 2019

Read/write microplate and picklist data for lab automation

bioprinter

Last released on Feb 5, 2019

saboteurs

Last released on Dec 17, 2018

Identify agents impairing success accross experiments.

blabel

Last released on Nov 15, 2018

Generate multi-page, multi-label pdfs in Python.

flametree

Last released on Aug 9, 2018

Python file and zip operations made easy

caravagene

Last released on Jul 19, 2018

sequenticon

Last released on Jul 18, 2018

Generate human-friendly icons from DNA sequences

proglog

Last released on May 29, 2018

Log and progress bar manager for console, notebooks, web...

python-lala

Last released on Apr 27, 2018

Library of web access log analysis

taskpacker

Last released on Nov 20, 2017