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Username    EdinburghGenomeFoundry
Date joined   Joined on

33 projects

dnachisel

Last released on

Optimize DNA sequences under constraints.

genealloy

Last released on

GeneAlloy helps designing overlapping sequences.

DnaWeaver

Last released on

Make ordering and assembly plans for DNA sequences

bandwitch

Last released on

Enzyme selection for DNA verification and identification

bandwagon

Last released on

Simulate DNA band patterns for gel migration experiments

dnacauldron

Last released on

Cloning simulation for DNA assembly (Golden Gate, Gibson...)

goldenhinges

Last released on

DNA overhangs design for Golden Gate etc.

kappagate

Last released on

Predict valid-clone-rates in Golden Gate DNA assemblies

pdf_reports

Last released on

Create nice-looking PDF reports from HTML content.

tatapov

Last released on

Provides DNA overhang misannealing data (Potatov 2018).

primavera

Last released on

Primer selection + data analysis for DNA assembly validation

geneblocks

Last released on

Library to compare DNA sequences (diff, common blocks, etc.)

easy-dna

Last released on

Methods for DNA sequence reading, writing and editing.

zymp

Last released on

Design compact sequences with many enzyme restriction sites.

synbiopython

Last released on

Python tools for Synthetic Biology.

crazydoc

Last released on

Read genetic sequences from stylized docx files

dna_features_viewer

Last released on

Plot features from DNA sequences (e.g. Genbank) with Python

python_codon_tables

Last released on

Codon Usage Tables for Python, from kazusa.or.jp

icebreaker

Last released on

Python API for the JBEI ICE sample manager.

genome_collector

Last released on

Easily download and store taxID genomes from NCBI

snapgene_reader

Last released on

Convert Snapgene *.dna files dict/json/biopython.

topkappy

Last released on

Pythonic wrapper for the Kappa language (bio simulations)

genedom

Last released on

Genetic parts standardization

plateo

Last released on

Read/write microplate and picklist data for lab automation

bioprinter

Last released on

saboteurs

Last released on

Identify agents impairing success accross experiments.

blabel

Last released on

Generate multi-page, multi-label pdfs in Python.

flametree

Last released on

Python file and zip operations made easy

caravagene

Last released on

sequenticon

Last released on

Generate human-friendly icons from DNA sequences

proglog

Last released on

Log and progress bar manager for console, notebooks, web...

python-lala

Last released on

Library of web access log analysis

taskpacker

Last released on

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