Optimize DNA sequences under constraints.
GeneAlloy helps designing overlapping sequences.
Make ordering and assembly plans for DNA sequences
Enzyme selection for DNA verification and identification
Simulate DNA band patterns for gel migration experiments
Cloning simulation for DNA assembly (Golden Gate, Gibson...)
DNA overhangs design for Golden Gate etc.
Predict valid-clone-rates in Golden Gate DNA assemblies
Create nice-looking PDF reports from HTML content.
Provides DNA overhang misannealing data (Potatov 2018).
Primer selection + data analysis for DNA assembly validation
Library to compare DNA sequences (diff, common blocks, etc.)
Methods for DNA sequence reading, writing and editing.
Design compact sequences with many enzyme restriction sites.
Python tools for Synthetic Biology.
Read genetic sequences from stylized docx files
Plot features from DNA sequences (e.g. Genbank) with Python
Codon Usage Tables for Python, from kazusa.or.jp
Python API for the JBEI ICE sample manager.
Easily download and store taxID genomes from NCBI
Convert Snapgene *.dna files dict/json/biopython.
Pythonic wrapper for the Kappa language (bio simulations)
Genetic parts standardization
Read/write microplate and picklist data for lab automation
Identify agents impairing success accross experiments.
Generate multi-page, multi-label pdfs in Python.
Python file and zip operations made easy
Generate human-friendly icons from DNA sequences
Log and progress bar manager for console, notebooks, web...
Library of web access log analysis