3 projects
HIV-Isoform-Checker
Filters .gtf file of suspected HIV isoforms and confirms the isoform identities
Chimera-Buster
eliminates chimeric reads by comparing the UMI sequences and finding any matches in the 5 prime or 3 prime UMIs and keeping the sequence that has the highest prevalence
HIV-Isoform-filter
Filters .gtf file of suspected HIV isoforms and confirms the isoform identities