fcid

Last released Apr 22, 2024

Get Illumina sequencer metadata from flowcell/machine identifier

ezclermont

Last released Dec 1, 2021

ezclermont: phylotype your E. coli strains, in silico

annofilt

Last released Nov 16, 2020

Filter annotations from prokka

happie

Last released Jan 31, 2020

happie: horizontally acquired partial pangenome of inserted elements

focusDB

Last released Dec 13, 2019

Draft genome reassembly using riboSeed, for the construction of high resolution 16S databases

riboSeed

Last released Oct 30, 2019

riboSeed: assemble across rDNA regions

PlentyofBugs

Last released Sep 22, 2019

find your newly sequenced isolate the perfect companion reference genome

open-utils

Last released Jun 27, 2019

you didn't think you needed it til you did

clermontpcr

Last released Apr 24, 2018

clermontpcr: phylotype your strains, in silico

scaffoldsis

Last released Nov 28, 2017

genome scaffolder for prokaryotes

barrnap

Last released Oct 5, 2017

python package for barrnap

pyutilsnrw

Last released Sep 27, 2017

Python utils, by Nick