10 projects
bigsi
BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data
mykrobe
.
cbg
Coloured Bloom Graphs - Low memory multicolour de Bruijn graphs for indexing large collections of genomes
mykatlas
.
pyseqfile
Pyseqfile is a python wrapper on top of [seq_file](https://github.com/noporpoise/seq_file) which allow for reading multiple sequence file formats.
mccortex
.
redispartition
.
redishammingdist
.
ga4ghmongo
A document based Variant database inspired by ga4gh Variants schema
metasort
Filter reads based on taxonomy assignment from OneCodex.