12 projects
pydplace
A cldfbench plugin to curate D-PLACE datasets
add_ascertainment
Add Ascertainment Characters to Nexus File
pyclts
Programmatic access to CLTS
newick
A python module to read and write the Newick format
nexusmaker
nexusmaker - Nexus file maker for language phylogenies
python-nexus
A nexus (phylogenetics) file reader (.nex, .trees)
phylogemetric
A python library for calculating the delta score (Holland et al. 2002) and Q-Residual (Gray et al. 2010)
treemaker
A python tool for generating a Newick formatted tree from alist of classifications
abvdget
abvdget - download data from the Austronesian Basic Vocabulary Database
RateCounter
ratecounter - Nexus file rate counter for language phylogenies
journaltocs
A python wrapper for the JournalTOCs API (http://www.journaltocs.ac.uk/).
genbank-download
a small script to download nucleotide sequences from genbank using an accession number.