5 projects
fetch-tool
Utility to fetch public and private RAW read and assembly files from the ENA
assembly-uploader
Python scripts to upload primary metagenome and metatranscriptome assemblies to ENA on a per-study basis. This script generates xmls to register a new study and create manifests necessary for submission with webin-cli.
mgnify-pipelines-toolkit
Collection of scripts and tools for MGnify pipelines
mg-toolkit
Metagenomics toolkit.
combined-gene-caller
Combined gene caller for MGnify pipeline, to combine predictions from FragGeneScan and Prodigal
