An implementation of chunked, compressed, N-dimensional arrays for Python.
A Python package for extracting, transforming and loading tables of data.
A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
A Python package for exploring and analysing genetic variation data.
Functions for exploratory analysis of genome variation data.
Statistical functions for genome variation data.
Tensor functions for genetic variation data.
A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file.
Load numpy arrays from a VCF (variant call file).
Exploration and Analysis of genetic variation data.
Optional extensions for the petl package.
Convenient plotting functions for variant call data.
Please note, development of this package has moved to https://github.com/alimanfoo/vcfnp
A simple library for validating data contained in CSV files or similar row-oriented data sources.