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13 projects

thresholdmodel

Last released on

Simulate a continuous-time threshold model on static networks.

epipack

Last released on

Fast prototyping of epidemiological models based on reaction equations. Analyze the ODEs analytically or numerically, or run stochastic simulations on networks/well-mixed systems.

binpacking

Last released on

Heuristic distribution of weighted items to bins (either a fixed number of bins or a fixed number of volume per bin). Data may be in form of list, dictionary, list of tuples or csv-file.

netwulf

Last released on

Interactively visualize networks with Ulf Aslak's d3-tool from Python.

bfmplot

Last released on

Snippet collections for plots how I make them.

gtom

Last released on

computes the general topological overlap matrix of an undirected network

couzinswarm

Last released on

Simulating fish swarming behavior with the model by Iain Couzin et al.

smallworld

Last released on

Generate modified small-world networks and compare with theoretical predictions.

cividis

Last released on

Register `cividis` with matplotlib, a color map optimized for color vision deficiency, as published in Nuñez, et al. (2018), PLoS ONE 13(7): e0199239 .

fisheye

Last released on

Transform single points or arrays of points using several fisheye functions.

simind

Last released on

Compute various incidence based or abundance based similarity indices between two numpy arrays.

effective-distance

Last released on

Generates a radial layout for trees whose nodes are associated with a distance to the root.

radial-distance-layout

Last released on

Generates a radial layout for trees whose nodes are associated with a distance to the root.

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