9 projects
kilosort
spike sorting pipeline
minimodel
single neuron minimodels for visual cortex
cellpose
anatomical segmentation algorithm
rastermap
Unsupervised clustering algorithm for 2D data (neurons by time)
suite2p
Pipeline for calcium imaging
facemap
Pose estimation and processing SVDs of videos
neuropop
analysis tools for neural population recordings
cellpose-napari
a generalist algorithm for anatomical segmentation
EnsemblePursuit
A sparse matrix factorization algorithm for extracting co-activating neurons from large-scale recordings