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Christopher J Markiewicz

Username    cjmarkie
Date joined   Joined

31 projects

mriqc

Last released

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.

bids-validator

Last released

Validator for the Brain Imaging Data Structure

pydra-nipype1

Last released

Tools for importing nipype 1.x interfaces into Pydra

smriprep-docker

Last released

A wrapper for generating Docker commands using regular sMRIPrep syntax

smriprep

Last released

Structural MRI Preprocessing Pipelines

dandi

Last released

Command line client for interaction with DANDI archive elements

pydra

Last released

Pydra dataflow engine

bidsschematools

Last released

Python tools for working with the BIDS schema.

templateflow

Last released

TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.

niworkflows

Last released

NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.

fmriprep-docker

Last released

A wrapper for generating Docker commands using regular fMRIPrep syntax

fmriprep

Last released

A robust and easy-to-use pipeline for preprocessing of diverse fMRI data

nibabel

Last released

Access a multitude of neuroimaging data formats

sdcflows

Last released

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.

pybids

Last released

bids: interface with datasets conforming to BIDS

nipreps-versions

Last released

Version schemes for nipreps tools

nitime

Last released

Nitime: timeseries analysis for neuroscience data

pydra-dcm2niix

Last released

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter

pydra-mrtrix3

Last released

Pydra tasks for MRtrix3

versioneer

Last released

Easy VCS-based management of project version strings

looseversion

Last released

Version numbering for anarchists and software realists

miniqc

Last released

A BIDS app for performing minimal QC beyond validation

quickshear

Last released

Quickshear Defacing for Neuroimages

bsmschema

Last released

A Pydantic schema for BIDS Stats Models

nipype

Last released

Neuroimaging in Python: Pipelines and Interfaces

improf

Last released

The import profiler

fitlins

Last released

Fit Linear Models to BIDS Datasets

niflow-nipype1-workflows

Last released

niflow-nipype1-workflows workflow package

niflow-manager

Last released

nfm: niflow management tool

niflow-nipype1-examples

Last released

niflow-nipype1-examples workflow package

mkdocs-branchcustomization-plugin

Last released

Update mkdocs configuration based on the git branch

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