4 projects
tibanna
Tibanna runs portable pipelines (in CWL/WDL) on the AWS Cloud.
benchmark-4dn
Benchmark functions that returns total space, mem, cpu given input size and parameters for the CWL workflows
tibanna-ff
Tibanna runs portable pipelines (in CWL/WDL) on the AWS Cloud.
hic2cool
Converter between hic files (from juicer) and single-resolution or multi-resolution cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as an imported package or a stand-alone Python tool for command line conversion.
