17 projects
typeline
Write dataclasses to delimited text formats and read them back again.
bedspec
An HTS-specs compliant BED toolkit.
fgpyo
Python bioinformatics and genomics library
prymer
Python primer design library
pybedlite
Python classes for interfacing with bed intervals
caseless
A typed dictionary in Python with case-insensitive keys
pyfgaws
Tools and python libraries for working with AWS.
sample-sheet
An Illumina Sample Sheet parsing library
seattle-food-truck
Python client for the glorious food trucks in Seattle
monoclparse
Parse Monocl Excel business report documents and intersect them!
snakescale
Non-strict wrappers for the data pipelining language Snakemake.
pendant
Python 3.6+ library for submitting to AWS Batch interactively.
reticle
Python 3.6+ library for submitting to AWS Batch interactively.
krakenplot
Plot the summary output from Kraken.
nucleic
A Python 3.6 library for plotting mutational spectra.
mpl_helpers
A Python 3.6 library for tweaking matplotlib figures.
refgene_parser
Quickly parse genes and exons from a RefGene file
