12 projects
hicstuff
General purpose stuff to generate and handle Hi-C data in its simplest form.
modos-schema
Metadata schema for the Multi-Omics Digital Object System
pyfuzon
None
modos
SMOC Multi-Omics Digital Object System API
gimie
Extract structured metadata from git repositories.
tinycov
Standalone command line tool to visualize coverage from a BAM file
mtg-ontology
An ontology describing Magic: The Gathering.
renku-bio
Renku plugin to annotate projects and datasets metadata with biological samples.
chromosight
Detect loops (and other patterns) in Hi-C contact maps.
hicreppy
Reimplementation of the hicrep with added support for sparse matrix and multiple chromosomes.
pareidolia
Multi-sample change detection in Hi-C patterns
instagraal
Large genome reassembly based on Hi-C data.
