10 projects
datonius
Python model package for the CFSAN Datonius framework (we're probably not calling it that.)
vcftoolz
Tools for working with Variant Call Format files.
porerefiner
To help you manage your pores
sra-quick-submit
Pip package for SRA Quick-Submit, a goofy SRA submission tool from 2013.
snp-pipeline
Script and functions for SNP matrix construction
jobrunner
An abstraction layer to run jobs on HPC clusters using Grid Engine, Torque, or locally.
qarrayrun
A helper tool for running array jobs on an HPC computational node.
refchooser
Tools to help choosing a reference assembly.
snp-mutator
Generate mutated sequence files from a reference genome.
fastatools
Tools for working with fasta files.
