9 projects
WDL-AID
Automatic Input Documentation for WDL workflows
pytest-workflow
A pytest plugin for configuring workflow/pipeline tests using YAML files
biowdl-input-converter
Converting various input formats into WDL structs for BioWDL pipelines.
collect-columns
Retrieve a column for each in a set of tables, placing them in a single output table.
chunked-scatter
Chunk and scatter the regions in a bed or sequence dict file
singularity-permanent-cache
Creates a permanent cache for singularity images on disk.
wdl-packager
Package a WDL and its imports into a zip file.
prepull-singularity
A tool for pulling singularity images in HPC environments.
biotdg
Bioinformatics Test Data Generator
