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Rudolph Pienaar

Username    debio
Date joined   Joined

47 projects

pypx

Last released

PACS/ChRIS core tools and utils

pfdo-med2image

Last released

Runs med2image on each nested dir of an inputdir

caw

Last released

ChRIS client library

med2image

Last released

(Python) utility to convert medical images to jpg and png

pfdo-run

Last released

Run arbitrary CLI on each nested dir of an inputdir

python-chrisclient

Last released

(Python) client for the ChRIS API

chris-plugin

Last released

ChRIS plugin helper

pybicpl

Last released

Python interface for basic MNI .obj file format. Supports read, write, and calculations on a vertex neighbor graph.

pycivet

Last released

Object-oriented CIVET bindings for Python

python-pfconclient

Last released

(Python) client for the Pfcon API

pfmisc

Last released

Misc utilities for FNNDSC python repos

pull-scp

Last released

This plugin application is used to recursively copy data from a remote host into an analysis root node.

pfstate

Last released

class-defintion stateful module

pfdicom-tagExtract

Last released

Extract DICOM header info -- part of the pf* family.

pfdicom-tagSub

Last released

Process DICOM tags and performs substitutions -- part of the pf* family.

chrisapp

Last released

Superclass for Chris plugin apps

chrispile

Last released

Syntactic sugar for running ChRIS apps locally

pfdo-mgz2image

Last released

Runs mgz2image on each nested dir of an inputdir

mgz2imgslices

Last released

(Python) utility to filter mgz volumes to per-voxel-value directories of jpg/png image slices

pfdo

Last released

Base machinery for performing operations on pftrees

pfurl

Last released

(Python) Path-File URL comms

pftree

Last released

Utility to create dict representations of file system trees.

mgz2imagetree

Last released

(Python) utility to filter mgz volumes to per-voxel-value directories of jpg/png image slices

pfcon

Last released

(Python) Process and File Controller

pfioh

Last released

Path-and-File-IO-over-HTTP

pman

Last released

(Python) Process Manager

pyimgconvert

Last released

(Python) utility which acts as a wrapper around the Linux CLI: convert

medcon

Last released

A ChRIS DS plugin that wraps around medcon and provides NifTI to DICOM conversion capability.

python-chrisstoreclient

Last released

(Python) client for the ChRIS store API

z2labelmap

Last released

Convert lh/rh z-score vector to FreeSurfer labelmap

pfdcm

Last released

Path and File DICOM

pfstorage

Last released

object storage interface

pfdicom-rev

Last released

Process DICOM trees and create JSON summares for the ReV viewer.

pfdicom

Last released

Base module for parsing DICOM files in the pf* family.

pfdicom-agesort

Last released

Process ChRIS trees of DICOM data and reorder by age.

freesurfer-pp-moc

Last released

A simple/dummy app that simulates a FreeSurfer run

mpcs

Last released

This app simulates an MPC compute call and creates a z-score file.

pacscopy

Last released

copy from (openstorage) to output directory

freesurfer-pp

Last released

A simple/dummy app that simulates a FreeSurfer run

mri10yr06mo01da-normal

Last released

An anonymized MRI exemplar

simpledsapp-moc

Last released

A simple DS type ChRIS application specifically created for the Massachusetts Open Cloud remote computing environment.

simplefsapp-moc

Last released

A demo/testing simplefsapp for the MOC compute environment.

simpledsapp

Last released

A simple/dummy ChRIS DS app

pfdicomtag

Last released

(Python) utility to extract meta data from trees of organized DICOM files.

pacsretrieve

Last released

Interact with a PACS through an intermediary service, "pfdcm" (not included).

pacsquery

Last released

Query a PACS through an intermediary service, "pfdcm" (not included).

dcmutils

Last released

A collection of DICOM related utilities

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