14 projects
phanotate
A a tool to annotate phage genomes
genbank
Code to work with Genbank files
prfect
A tool to predict programmed ribosomal frameshifts
genotate
A tool to annotate microbial genomes
Aragorn
A tool to predict tRNAs and tmRNAs
LinearFold
A a tool to predict RNA secondary structure and minimum free energy
phacts
A program to predict the lifestyle (virulent/lytic or temperate/lysogenic) of a phage genome
hotknots
A a tool to predict RNA secondary structure, including pseudoknots
repeatfinder
A package for finding repeats in a DNA sequence
read-genbank
A script for parsing GenBank files
fastpath
A package for finding the best path through a network graph
goodorfs
A a tool to find coding orfs
funnyjoke
The funniest joke in the world
score-rbs
A tool to score prokaryotic ribosomal binding sites
