29 projects
pypipegraph2
Advanced python 'what changed and what do we need to do' tracking
mbf-bam
Helpers to deal with BAM files
mbf-gtf
Fast Parser for Ensembl formated GTF Files to Pandas DataFrames
mbf
Functionality for genomics
i3-instant-layout
Automatic 'list based' layouts for the i3 window manager
dppd
A pythonic dplyr clone
mxp
qPCR fileformat reader
dppd-plotnine
Combines plotnine and dppd
mbf-nested-intervals
None
mbf-pandas-msgpack
Pandas interface to msgpack
marburg-biobank
Interface code to interact with data from the Ovara.net biobank.
sanetime-py3
A sane date/time python interface: better epoch time, timezones, and deltas -- django support as well. Now with python3 support
mbf-genomics
All about intervals on genomic data
mbf-comparisons
Add a short description here!
dicodon-optimizer
Dicodon optimization library
pypipegraph
A workflow (job) engine/pipeline for bioinformatics and scientific computing.
solidpython-ff
Solidpython - fast and furious extension
mbf-externals
wrappers for external algorithms
mbf-genomes
wrappers for external algorithms
mbf-r
R interface code
rnaseqmixture
rnaseq mixture correction
mbf-heatmap
swiss army heatmaps for delayed data frames and ChIPseq data
mbf-align
Alignment of high througput sequencing data
mbf-sampledata
sample data for testing other packages
mbf-qualitycontrol
various file formats
mbf-fileformats
various file formats
mbf-anysnake
wrappers for docker+python+R+bioconductor
pyggplot
A Pythonic wrapper around R's ggplot
pydataframe
A DataFrame (table like datastructure) for Python, similar to R's dataframe based on numpy arrays
