10 projects
monet
Monet: An open-source Python package for analyzing and integrating single-cell RNA-Seq data using PCA-based latent spaces.
gopca2
GO-PCA 2
xlmhg
XL-mHG: A Semiparametric Test for Enrichment
moana
Moana: A robust and scalable cell type classification framework for single-cell RNA-Seq data.
genometools
GenomeTools: A Python Toolkit for Working with Genomic Data.
gopca
GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge
singlecell
SingleCell: A Python Package for Processing Single-Cell RNA-Seq Data.
pyaffy
pyAffy: Processing raw data from Affymetrix expression microarrays in Python.
goparser
GOparser - A Python Framework for Working with Gene Ontology (GO) Terms and Annotations
gopca-server
GO-PCA Server: A tornado-based web server for running GO-PCA