10 projects
nanomonsv
Python tools for detecting structural variation from nanopore sequence data
genomon-sv
Python tools for detecting somatic structural variation from cancer genome sequencing data.
junc-utils
Python programs for analyzing splicing junctions
sv-utils
Python programs for analyzing GenomonSV results
genomon-expression
Python tools for calculating fkpm values from RNA-seq
annot-utils
Python programs for processing gene annotation files
intron-retention-utils
Python tools for extracting intron retention events
savnet
Python tools for detecting mutations causing splicing changes
chimera-utils
Python tools for processing chimeric reads and lists of gene fusions.
fusionfusion
Python tools for extracting highly confident fusion transcripts from the results of several RNA-seq alignment tools.
