4 projects
GEOparse
Python library to access Gene Expression Omnibus Database (GEO)
ushuffle
A Cython wrapper over uShuffle - a useful tool for shuffling biological sequences while preserving the k-let counts.
MetaProfile
Python package that facilitates making gene meta-profiles.
Jobber
Jobber is a program that executes pipelines. It manages job dependencies, restarts them if necessary and logs their status in a database. Jobs are persisted in a database and survive system crashes.