59 projects
pyclesperanto
GPU-accelerated image processing in python using OpenCL
stackview
Interactive image stack viewing in jupyter notebooks
git-bob
git-bob uses AI to solve Github-issues and review pull-requests. It runs inside the Github CI, no need to install anything on your computer.
napari-segment-blobs-and-things-with-membranes
A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes
napari-pyclesperanto-assistant
GPU-accelerated image processing in napari using OpenCL
napari-assistant
A pocket calculator like interface to image processing in napari
devbio-napari
A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.
bia-bob
A Jupyter-based assistant for data analysis tasks
napari-tools-menu
Attaches a customizable Tools menu to napari
napari-simpleitk-image-processing
Process and analyze images using SimpleITK in napari
pyclesperanto-prototype
GPU-accelerated image processing in python using OpenCL
napari-stress
Interactive surface analysis in napari for measuring mechanical stresses in biological tissues
ipy-llm-kernel
A Jupyter kernel for communicating with large language models
napari-workflows
Data structures for managing image processing workflows in napari
napari-clusters-plotter
A plugin to use with napari for clustering objects according to their properties
blablado
Use LLMs to call functions.
jgo
Launch Java code from Python and the CLI, installation-free.
napari-xgboost
A plugin for pixel classification using XGBoost
scyjava
Supercharged Java access from Python
napari-folder-browser
Browse folders of images and open them using double-click
story-writer
A AI-based story writer Python library which uses OpenAI's chatGPT and Dall-E to generate PDFs with a story and a picture from a prompt and writes them into a PDF.
darth-d
A simple to use image generator based on OpenAIs DALL-E
napari-time-slicer
A meta plugin for processing timelapse data in napari timepoint by timepoint
napari-accelerated-pixel-and-object-classification
Pixel and label classification using OpenCL-based Random Forest Classifiers
napari-cupy-image-processing
GPU-accelerated image processing using CUDA
napari-script-editor
A python script editor for napari
napari-crop
Crop regions in napari manually
guanine-crystal-analysis
A plugin for the guanine crystal segmentation, classification and characterization in the zebrafish eye
napari-skimage-regionprops
A regionprops table widget plugin for napari
napari-laptrack
Tracking particles in Napari, based on the LapTrack library
napari-blender-bridge
Transfer surface layers between Napari and Blender
napari-process-points-and-surfaces
Process and analyze surfaces using open3d and vedo in napari
napari-layer-details-display
A display for layer information and properties
napari-plugin-search
Find napari plugins
apoc
Accelerated Pixel and Object Classifiers based on OpenCL
napari-owncloud
Browse folders and images in owncloud / nextcloud servers and open them using just a double-click!
napari-assistant-plugin-generator
Auto-generate python code from within napari to make napari-assistant compatible plugins
napari-plot-profile
Plot intensity along a line and create topographical views in napari
the-segmentation-game
Gamified image segmentation quality estimation
napari-brightness-contrast
Advanced layer visualization options
beetlesafari
A napari plugin for loading and working with light sheet imaging data of developing embryos acquired using ClearControl, e.g. _Tribolium castaneum_.
napari-workflow-inspector
Inspect relationships between image processing operations in active workflows in napari
napari-workflow-optimizer
Optimize image processing workflows in napari for segmentation quality
napari-animated-gif-io
Save 3D image stacks as animated gifs
napari-manual-split-and-merge-labels
Split and merge labels in napari manually
napari-mahotas-image-processing
Image processing based using the Mahotas library in napari
biapol-utilities
Collection of bio-image analysis functions of the biapol group @ TU Dresden.
clesperanto
A graphical user interface for clesperanto based on napari
napari-mouse-controls
Control napari using a touch screen
napari-curtain
View one image over another as curtain
napari-tabu
A plugin for handling multiple napari windows
haesleinhuepf-pyqode.core
PyQt/PySide Source Code Editor Widget
napari-webcam
Use your webcam from napari
natari
Napari gaming
haesleinhuepf-pyqode.python
Adds python support to pyqode.core
biapol-taurus
Bio-image analysis tools for the taurus cluster at TU Dresden
napari-oclrfc
Pixel and label classification using OpenCL-based Random Forest Classifiers
oclrfc
OpenCL-based Random Forest Classifier
pyclesperanto-assistant
Assistant for pyclesperanto scripting
