9 projects
pathogena
The command line and Python client for EIT Pathogena.
fn5
Fast, scalable SNP distance calculation from disk.
gnomonicus
Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants
bio-grumpy
gumpy re-implemented in Rust
vcf-subset
None
gpas
The command line and Python client for the GPAS platform
gumpy
Genetics with Numpy
piezo
Predicting the effect of an antibiotic from gene mutations
gpas-sc2
A command line client for the Global Pathogen Analysis Service
