7 projects
gnomonicus
Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants
gumpy
Genetics with Numpy
vcf-subset
Efficient VCF subsetting by genome position.
piezo
Predicting the effect of an antibiotic from gene mutations
gpas
The command line and Python client for the GPAS platform
fn5
Fast, scalable SNP distance calculation from disk.
gpas-sc2
A command line client for the Global Pathogen Analysis Service