13 projects
autoparis
Python package for Autoparis Workflow.
pathpretrain
Simple setup train image models.
arctic-ai
Python package for Arctic Workflow. Mirrors jupyter developments.
submit-hpc
Collection of growing job submission scripts, not to replace workflow specifications.
pathflow-mixmatch
Don't mix, match! Simple utilities for improved registration of Histopathology Whole Slide Images.
pymethylprocess
Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.
interactiontransformer
Extract interactions from complex model using SHAP and add to linear model..
methylnet
A modular deep learning approach for Methylation Predictions.
pathflowai
A modular approach for preprocessing and deep learning on histopathology images.
