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  jmschreiber

  Joined on Apr 28, 2014

7 projects

pomegranate

Last released on Jan 3, 2018

Pomegranate is a graphical models library for Python, implemented in Cython for speed.

rambutan

Last released on Oct 16, 2015

rambutan is a python wrapper for caffe, aiming to provide a simpler way to define, train, and evaluate models.

pythonic-porin

Last released on Feb 1, 2015

Nanopore Data Analysis package. Provides tools for reading data, performing event detection, segmentation, visualization, and analysis using hidden Markov models, and other tools. Designed for the UCSC Nanopore Group.

yahmm

Last released on Jan 29, 2015

YAHMM is a HMM package for Python, implemented in Cython for speed.

antz

Last released on Jan 7, 2015

antz is a bioinformatics package written for python.

yabn

Last released on Nov 14, 2014

YABN is a Bayesian Network package for Python, implemented in Cython for speed.

discern

Last released on Nov 12, 2014

DISCERN is a method for identifying perturbations between two similar graphs. It takes in samples from two networks, and identifies which features are conditionally dependent on different features between the two

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