31 projects
napari
n-dimensional array viewer in Python
affinder
Quickly find the affine matrix mapping one image to another using manual correspondence points annotation
zarpaint
Paint segmentations directly to on-disk/remote zarr arrays
napari-svg
A plugin for writing svg files with napari
npe2
napari plugin engine v2
scikit-image
Image processing in Python
magicgui
build GUIs from python types
napari-sphinx-theme
Bootstrap-based Sphinx theme from the napari community
napari-animation
A plugin for making animations in napari
iterseg
napari plugin for iteratively improving unet-watershed segmentation
platetrack
napari plugin for tracking platelets with trackpy
plateletanalysis
plateletanalysis
annotrack
napari plugin for annotating tracks to estimate error rates
napari-tiff
official napari tiff reader and writer.
napari-graph
Fast editable graphs in Python and numba
napari-console
A plugin that adds a console to napari
nd2-dask
Plugin to load nd2 data into napari
skan
Skeleton analysis in Python
napari-plugin-manager
Install plugins for napari, in napari.
ont
Collection of random functions that @jni finds useful
mysquishy
Recompress zarr chunks in-place
platelet-unet-watershed
Segment platelets with pretrained unet and affinity watershed
napari-plugin-engine
napari plugin engine, fork of pluggy
viridis
Tree data structures and algorithms
llc-tools
Prettier LowLevelCallables
mpl-volume-viewer
matplotlib orthoslice volume viewer in Python
h5cat
Quick preview of hdf5 files
llc
Prettier LowLevelCallables
skimage
Dummy package that points to scikit-image
microscopium
Clustering of High Content Screen Images
cellom2tif
Convert Cellomics images to TIFF.
