snakemake

Last released Feb 3, 2023

Workflow management system to create reproducible and scalable data analyses

snakedeploy

Last released Feb 3, 2023

Deploy a snakemake pipeline from GitHub

snakefmt

Last released Feb 3, 2023

The uncompromising Snakemake code formatter

snakemake-wrapper-utils

Last released Jan 9, 2023

A collection of utils for Snakemake wrappers.

calfreeslots

Last released Sep 26, 2022

Command line utility to print free calendar slots in the coming days.

yte

Last released Jun 3, 2022

A YAML template engine with Python expressions

vispr

Last released Feb 15, 2017

Interactive HTML5 visualization for CRISPR/Cas9 knockout screen experiments.

peanut

Last released Jul 16, 2015

A massively parallel GPU read mapper using OpenCL.

alpaca-variant-caller

Last released Feb 6, 2015

An algebraic parallel SNV caller using OpenCL

trminer

Last released Mar 5, 2012

mine scientific publications for interesting sentences using patterns