17 projects
kegg-pathway-profiler
KEGG Pathway Profiler
rule-evaluator
Lightweight Python-based nested rule evaluator
clairvoyance-feature-selection
AutoML simultaneous bayesian hyperparameter optimization and feature selection
pyhmmsearch
Fast implementation of HMMSEARCH optimized for high-memory systems using PyHmmer
ensemble-networkx
Ensemble networks in Python
pykofamsearch
Fast implementation of KofamScan optimized for high-memory systems using PyHmmer
metabolic-niche-space
Metabolic niche space analysis
soothsayer
High-level package for (bio-)informatics
fastq-preprocessor
Fast short read fastq preprocessor with optional contamination removal
hive-networkx
Hive plots in Python
compositional
Compositional data analysis in Python
genopype
Architecture for building creating pipelines
hierarchical-ensemble-classifier
Customizable Scikit-Learn compatible hierarchical ensemble of classifiers models
weighted-bootstrap-randomforest
Implementations of Weighted bootstrap Random Forests classifier and regressors
soothsayer-utils
Utility functions for Soothsayer
veba
Virus Eukaryote Bacteria Archaea
goomba
Architecture for building creating pipelines
