15 projects
readimc
Python package for reading imaging mass cytometry (IMC) files
steinbock
A toolkit for processing multiplexed tissue images
tissuumaps-schema
Pydantic schema for TissUUmaps
birka
A tool for bioimage data validation and archival
tagbiljett
A command-line tool for querying SJ ticket prices
napari-points2regions
A napari plugin for Points2Regions
raw2tmap
Convert OME-Zarr files to TMAP format
napari-roi
Select regions of interest (ROIs) using napari
napping
Control point mapping and coordination transformation using napari
xtiff
A tiny Python library for writing multi-channel TIFF stacks
mcd2zarr
Command line tool to convert MCD files to Zarr
napari-hierarchical
Hierarchical file format support for napari
napari-imc
Imaging Mass Cytometry (IMC) file type support for napari
napari-czifile2
Carl Zeiss Image (.czi) file support for napari
spellmatch
Spatial cell representation matching
