8 projects
pywikipathways
Python Client Package for WikiPathways.
bridgedbpy
Code for using BridgeDb identifier mapping framework from within Python
ecell4-base
A software platform for modeling, simulation and analysis of complex, heterogeneous and multi-scale systems like the cell. E-Cell has multi-algorithm, multi-timescale and multi-spatial-representation as its central feature.
ecell4
A software platform for modeling, simulation and analysis of complex, heterogeneous and multi-scale systems like the cell. E-Cell has multi-algorithm, multi-timescale and multi-spatial-representation as its central feature.
dash-pathway
pathway2cyjs
Convert Escher, Wikipathways, KEGG pathway data to Cytoscape.js JSON (.cyjs)
irb-kernel
A Jupyter kernel for irb (REPL for Ruby programming language)
py2cytoscape
Utilities to use Cytoscape and Cytoscape.js from Python
