6 projects
tbtamr
Running TB-Profiler for MDU
mutamr
Variant detection for AMR prediction
abritamr
Running AMRFinderPlus for MDU
bohra
A bioinformatics pipeline for analysing short read Illumina data microbiological public health.
coreugate
calculate pair-wise allelic distances from cgMLST implements chewBBACAs
Troika-TB
A pipeline implementing TB-Profiler for batch detection and reporting of anti-microbial resistance in TB for public health and clinical use.
