15 projects
projectframe
Python package for multi-dimensional tabular data
ngsfragments
Python package for Next Generation Sequencing fragment manipulation
cfdna
Python package for fragment manipulation for cfDNA
linear_segment
Python package for Bayesian Change Point and Circular Binary Segmentation
intervalframe
Python package for interval manipulation
genome_info
Python package genome annotations
hmmCNV
Python package for Copy-Number Variation calling
ailist
Python package for Augmented Interval List
hg38genome
Python package hg38 genome annotation
hg19genome
Python package hg19 genome annotation
bcpseg
Python package for Bayesian Change Point Segmentation
cbseg
Python package for Circular Binary Segmentation
dynamicTreeCut
Dynamic Tree Cut
SomVarIUS
A Python utility for calling somatic mutations from a BAM or SAM file
SASE_hunter
Signatures of Accelerated Somatic Evolution hunter