5 projects
scbamtools
High performance Cython + Python tools to process BAM files with tags as they arise in single-cell sequencing
mrfifo
Map-Reduce parallelism over FIFOs (named pipes)
spacemake
A bioinformatic pipeline for the analysis of spatial transcriptomic data
spacemake-mjens
A bioinformatic pipeline for the analysis of spatial transcriptomic data
fast-ska
A fast Cython implementation of the "Streaming K-mer Assignment" algorithm initially described in Lambert et al. 2014 (PMID: 24837674)
