5 projects
pctk
PhysiCell ToolKit: a tool for handling MultiCellDS output from PhysiCell and PhysiBoSS simulations.
csmemo
A Library implementing constraint-based methods for context-specific metabolic modeling
pyfastcore
A python-based implementation for the context-specific metabolic model extraction methods from Vlassis et al. 2014
flowmaps-data
A tool for downloading Spanish COVID-19 and mobility data
csm4cobra
Tools and methods for context-specific metabolic modeling
