19 projects
fmriprep-docker
A wrapper for generating Docker commands using regular fMRIPrep syntax
fmriprep
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data
nibabies-wrapper
A wrapper for generating Docker and Singularity commands for simpler NiBabies usage
nibabies
Processing workflows for magnetic resonance images of the brain in infants
nitransforms
NiTransforms -- Neuroimaging spatial transforms in Python.
templateflow
TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.
nipreps-synthstrip
NiPreps implementation of FreeSurfer's SynthStrip
smriprep-docker
A wrapper for generating Docker commands using regular sMRIPrep syntax
smriprep
Structural MRI Preprocessing Pipelines
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.
nireports
NiReports - The Visual Report System (VRS) of NiPreps
mriqc-learn
Learning on MRIQC-generated image quality metrics (IQMs).
niworkflows
NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.
sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.
eddymotion
Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.
migas
A Python package to communicate with a migas server.
nipreps
Namespace package for nipreps utilities
nirodents
NeuroImaging Rodents (NiRodents) provides processing tools for magnetic resonance images of the rodent brain.
dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
