pybbi

Last released Oct 18, 2024

Python bindings to the UCSC source for Big Binary Indexed (bigWig/bigBed) files.

assemblyinfo

Last released Jul 29, 2024

A Python library for working with harmonized genome metadata

cooltools

Last released Jul 1, 2024

Analysis tools for genomic interaction data stored in .cool format

ipylangchat

Last released Jun 27, 2024

Serverless chat UI Jupyter widget for langchain conversational AIs

bioframe

Last released Jun 19, 2024

Operations and utilities for Genomic Interval Dataframes.

cooler

Last released Jun 17, 2024

Sparse binary format for genomic interaction matrices.

pqdict

Last released Feb 13, 2024

A Pythonic indexed priority queue.

oxbow

Last released Jan 26, 2024

Read specialized bioinformatic file formats into dataframes.

higlass-python

Last released Oct 3, 2023

Python bindings for HiGlass

dask-ngs

Last released Jul 30, 2023

Scalable access to bioinformatics data with Dask.

clodius

Last released May 15, 2023

Tile generation for big data

svgpath2mpl

Last released Apr 26, 2021

SVG path parser for matplotlib