scBoolSeq

Last released Sep 3, 2026

scBoolSeq: Linking scRNA-Seq Statistics and Boolean Dynamics.

bonesis

Last released Sep 1, 2026

Synthesis of Most Permissive Boolean Networks

ginsim

Last released Sep 1, 2026

Python interface to GINsim and BioLQM API

maboss

Last released Jul 24, 2026

A python and jupyter API for the MaBoSS software

mpbn

Last released May 18, 2026

Simple implementation of Most Permissive Boolean networks

caspo

Last released Feb 10, 2026

Reasoning on the response of logical signaling networks with Answer Set Programming

colomoto-docker

Last released Feb 7, 2026

Helper script to run docker image colomoto/colomoto-docker

colomoto-jupyter

Last released Feb 7, 2026

CoLoMoTo helper functions for Juypter integration

algorecell-types

Last released Feb 3, 2026

Generic types for reprogramming predictions from logical models

donodo

Last released Jan 27, 2026

Bridging Docker images with Zenodo

pypint

Last released Aug 19, 2025

Python interface to Pint

erode-python

Last released Jun 7, 2023

modian

Last released Dec 1, 2022

Simple python library for Boolean networks

mpbn-sim

Last released Oct 21, 2022

Simulation of Most Permissive Boolean networks

profile-binr

Last released May 27, 2021

PROFILE methodology for the binarisation and normalisation of RNA-seq data

boolsim

Last released Jul 30, 2020

Python interface to boolSim

satex

Last released Jul 10, 2020

Helper script for managing SAT Heritage docker images

stablemotifs

Last released Jun 29, 2020

Python interface to StableMotifs

caspo-control

Last released Jun 29, 2020

Python wrapper for caspo control

actonet

Last released Jun 29, 2020

Abduction-based control of Boolean networks fixpoints

cabean

Last released Jun 29, 2020

Python interface to CABEAN, A Software Tool for the Control of Asynchronous Boolean Networks

adys

Last released Nov 19, 2018

Simple python library for Boolean networks