scikit-bio

Last released Jul 7, 2024

Data structures, algorithms and educational resources for bioinformatics.

biom-format

Last released May 11, 2024

Biological Observation Matrix (BIOM) format

emperor

Last released Jul 10, 2023

Emperor

unifrac

Last released Oct 19, 2021

High performance phylogenetic diversity calculations

empress

Last released Jul 21, 2021

Fast and scalable phylogenetic tree viewer for multi-omic data analysis

deblur

Last released Sep 14, 2018

Deblur

sourcetracker

Last released May 9, 2016

Python implementation of the SourceTracker R package.

qiita-spots

Last released Aug 25, 2015

Qiita: Spot Patterns

qiime-default-reference

Last released Jun 4, 2015

Default reference data files for use with QIIME.

qiime

Last released May 26, 2015

Quantitative Insights Into Microbial Ecology

burrito-fillings

Last released May 22, 2015

burrito-fillings: burrito application controllers for bioinformatics

burrito

Last released May 22, 2015

Framework for wrapping and controlling command-line applications.

platypus-conquistador

Last released Apr 26, 2015

Platypus Conquistador: Confirming specific taxonomic groups within your metagenomic samples.

sublime

Last released Mar 27, 2015

Submission ninja

qcli

Last released Dec 19, 2014

UNKNOWN

pyqi

Last released May 13, 2014

pyqi: expose your interface

readgood

Last released Mar 10, 2014

readgood

pir

Last released Feb 17, 2014

PIR: Powerpointing Is Rude

verman

Last released Feb 2, 2014

verman: version management

pynast

Last released Dec 5, 2013

The Python Nearest Alignment Space Termination tool