8 projects
vespa-effect
Predictor for single-amino acid variant effects in protein sequences (https://doi.org/10.1007/s00439-021-02411-y)
bio-embeddings
A pipeline for protein embedding generation and visualization
bio-embeddings-tape-proteins
Repostory of Protein Benchmarking and Modeling
bio-embeddings-plus
Protein sequence representations Learned Using Structural information (https://arxiv.org/abs/1912.05625)
bio-embeddings-deepblast
Deep Sequence Alignments.
bio-embeddings-esm
Pre-trained evolutionary scale models for proteins, from Facebook AI Research.
bio-embeddings-bepler
bio-embeddings-CPCProt
Parameter-efficient pretrained model for obtaining protein embeddings.
