6 projects
pyviewmaster
viewmastR uses machine learning implemented in Rust to perform automated cell type classification for single-cell genomic data. Currently viewmastR is authored to work with scRNAseq data, but more features are coming.
henipipe
A python wrapper for fast and parallel processing of sequencing data using CutnRun or CutnTag
piperna
A python wrapper for fast and parallel processing of bulk RNA Seq data
mergeBams
Merge sam/bam files with intelligent cell barcode preservation
qsubr
A python wrapper for a quick qsub command
cellwrapper
A python wrapper for fast and parallel processing of cellranger runs
